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International peer reviewed 2015

Aarnes, S.G., Hagen, S.B., Andreassen, R., Schregel, J., Knappskog, P.M., Hailer, F., Stenhouse , G., Janke, A., & H.G. Eiken (2015): Y-chromosomal testing of brown bears (Ursus arctos): Validation of a multiplex PCR-approach for nine STRs suitable for fecal and hair samples. - Forensic Science International: Genetics
L axel.janke@senckenberg.de
Bálint, M., Bartha, L., O'Hara, R.B., Olson, M., Otte, J., Pfenninger, M., Robertson, A. & I. Schmitt (2015): Relocation, high-latitude warming and host genetic identity shape the foliar fungal microbiome of poplars. - Molecular Ecology 24, 235–248 8 juergen.otte@senckenberg.de;Pfenninger@bio.uni-frankfurt.de;imke.schmitt@senckenberg.de;Miklos.Balint@senckenberg.de;bob.ohara@senckenberg.de
Bidon, T., Schreck, N., Hailer, F., Nilsson, M., & A. Janke (2015): Genome-wide search identifies 1.9 megabases from the polar bear Y chromosome for evolutionary analyses. - Genome Biology and Evolution L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de
Bock, F., Kuch, U., Pfenninger, M., & R. Müller (2015): Standardized laboratory feeding of larval Aedes japonicus japonicus. - Journal of Insect Science 15: 144.
7 Pfenninger@bio.uni-frankfurt.de;friederike.reuss@senckenberg.de
Domisch, S., Jähnig, S.C., Simaika, J.P., Kuemmerlen, M. & S. Stoll (2015): Application of species distribution models in stream ecosystems: the challenges of spatial and temporal scale, environmental predictors and species occurrence data. - Fundamental and Applied Limnology 186 (1-2), 45-61. 7 sonja.jaehnig@senckenberg.de;stefan.stoll@senckenberg.de
Edwards, S.V., Xi, Z., Janke, A., Faircloth, B.C., McCormack, J.E., Glenn, T.C., Zhong, B., Wu, S., Lemmon, E.M., Lemmon, A.R., Leaché, A.D., Liu, L. & C.C. Davis (2015): Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics. - Molecular Phylogenetics and Evolution 94 A: 447–462 L axel.janke@senckenberg.de
Favre, A., Päckert, M., Pauls, S.U., Jähnig, S.C., Uhl, D., Michalak, I. & A. Muellner-Riehl (2015): The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas. - Biological Reviews 90: 236-253. 6 steffen.pauls@senckenberg.de;pauls497@umn.edu;sonja.jaehnig@senckenberg.de;muellner-riehl@uni-leipzig.de;martin.paeckert@senckenberg.de
Feldmeyer, B., Greshake, B., Funke, E., Ebersberger, I. & M. Pfenninger (2015): Positive selection in development and growth rate regulation genes involved in species divergence of the genus Radix.- BMC Evolutionary Biology L bgreshake@googlemail.com;Pfenninger@bio.uni-frankfurt.de;ebersberger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Feurdean, A., Marinova, E., Nielsen, A.B., Liakka, J., Veres, D., Hutchinson, S.M., Braun, M., Timar-Gabor, A., Astalos, C., Mosbrugger, V. & T. Hickler (2015): Origin of the forest steppe and exceptional grassland diversity in Transylvania (central-eastern Europe). - Journal of Biogeography 42: 951-963. DM vmosbrugger@senckenberg.de;thomas.hickler@senckenberg.de ;angelica.feurdean@senckenberg.de;johan.liakka@senckenberg.de
Gallus, S., Hallström, B. M., Kumar, V., Dodt, W. G., Janke, A, Schumann, G. G. & M. Nilsson Janke (2015): Evolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devil. - Molecular Biology and Evolution (early Access) L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Gallus, S., Janke, A., Kumar, V & M.A. Nilsson (2015): Disentangling the relationship of the Australian marsupial orders using retrotransposon and evolutionary network analyses. - Genome Biology and Evolution   L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Gallus, S., Kumar, V., Bertelsen, M.F., Janke, A. & M.A. Nilsson (2015): Survey sequencing of the Java Mouse Deer (Tragulus javanicus) and Lesser kudu (Tragelaphus imberbis) genomes revealed differential expansion of RTE elements in Ruminantia. Gene Vol 571 (2) 271 - 278 L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Geismar, J., Haase, P., Nowak, C., Sauer, J. & S.U. Pauls (2015): Local population genetic structure of the montane caddisfly Drusus discolor is driven by overland dispersal and spatial scaling. - Freshwater Biology 60: 209-221. 8 peter.haase@senckenberg.de;Carsten.Nowak@senckenberg.de;steffen.pauls@senckenberg.de;pauls497@umn.edu;jutta.geismar@senckenberg.de
Glynou, K., Ali, T., Buch, A.K, Kia, S.H., Ploch, S., Xia, X, Celik, A., Thines, M & J.G. Macia-Vicente (2015): The local environment determines the assembly of root endophytic fungi at a continental scale. - Enviromental Microbiology, doi:10.1111/1462-2920.13112. 8 marco.thines@senckenberg.de;ali.tahir@senckenberg.de;xiaojuan.xia@senckenberg.de
Khaliq, I., Fritz, S.A., Prinzinger, R., Pfenninger, M., Böhning-Gaese, K. & C. Hof (2015): Global variation in thermal physiology of birds and mammals: evidence for phylogenetic niche conservatism only in the tropics. - Journal of Biogeography 42: 2187-2196. 7 katrin.boehning-gaese@senckenberg.de;Pfenninger@bio.uni-frankfurt.de;susanne.fritz@senckenberg.de;christian.hof@senckenberg.de;imran.khaliq@senckenberg.de
Koch, K., Algarb, D., Searle, J. B., Pfenninger, M. & K. Schwenk (2015): A voyage to Terra Australis: human-mediated dispersal of cats. -  BMC Evolutionary Biology 15:542 8 Pfenninger@bio.uni-frankfurt.de;schwenk@uni-landau.de;Koch@bio.uni-frankfurt.de
Kuemmerlen, M., Petzoldt, T. & S. Domisch (2015): Ecological models in freshwater ecosystems. - Fundamental and Applied Limnology/Archiv für Hydrobiologie 186 (1-2), 1-3. 7
Kuemmerlen, M., Schmalz, B., Cai, Q., Fohrer, N. & S.C. Jähnig (2015): An attack on two fronts: predicting how changes in land use and climate affect the distribution of stream macroinvertebrates. - Freshwater Biology (in press). 7 sonja.jaehnig@senckenberg.de
Kumar, V., Kutschera, V.E., Nilsson, M.A. & A. Janke (2015): Genetic signatures of adaptation revealed from transcriptome sequencing of Arctic and red foxes. - BMC Genomics (2015) 16:585 L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Lawes, M.J., Fisher, D.O., Johnson, C.N., Blomberg, S.P., Frank, A.S.K., Fritz, S.A., McCallum, H., VanDerWal, J., Abbott, B.N., Legge, S., Letnic, M., Thomas, C.R., Thurgate, N., Fisher, A., Gordon, I.J. & A. Kutt (2015): Correlates of recent declines of rodents in northern and southern Australia: habitat structure is critical. -PLoS One 10: e0130626. 7 susanne.fritz@senckenberg.de
M. Nilsson Janke (2015): The devil is in the details: transposable element analysis of the Tasmanian devil genome. - Mobile Genetic Elements L Maria.Nilsson-Janke@senckenberg.de
Macher, J.-N., Rozenberg, A., Pauls, S.U., Tollrian, R., Wagner, R. & F. Leese (2015): Assessing the phylogeographic history of the montane caddisfly Thremma gallicum: a comparison of sequence data from mitochondria and restriction-site associated DNA markers (RAD). - Ecology and Evolution 5: 648-662. 6 steffen.pauls@senckenberg.de;pauls497@umn.edu
Oppold, A., Kreß, A., Vanden Bussche, J., Diogo, J.B., Kuch, U., Oehlmann, J., Vandegehuchte, M.B. & R. Müller (2015): Epigenetic alterations and decreasing insecticide sensitivity of the Asian tiger mosquito Aedes albopictus. -   Ecotoxicology and Environmental Safety 122, p 45-53 L Oehlmann@bio.uni-frankfurt.de;kress@bio.uni-frankfurt.de;ann-marie.oppold@senckenberg.de;joao.diogo@senckenberg.de
Patel, S., Schell, T., Eifert, C., Feldmeyer, B. & M. Pfenninger (2015): Characterizing a hybrid zone between a cryptic species pair of freshwater snails. - Molecular Ecology, 24: 643–655 L Pfenninger@bio.uni-frankfurt.de
Pfenninger, M., Patel, S., Arias-Rodriguez, L., Feldmeyer, B., Riesch, R. & M. Plath (2015): Unique evolutionary trajectories in repeated adaptation to hydrogen sulphide-toxic Habitats. - Molecular Ecology 24: 5446-5459 8 Pfenninger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Römbke, J., Aira, M., Backeljau, T., Breugelmans, K., Dominguez, J., Funke, E., Graf, N., Hajibabaei, M., Perez-Losada, M., Porto, P.G., Schmelz, R.M., Vierna, J., Vizcaino, A & M. Pfenninger (2015): DNA barcoding of earthworms (Eisenia fetida/andrei complex) from 28 ecotoxicological test laboratories. Applied Soil Ecology L Pfenninger@bio.uni-frankfurt.de
Sagor, G.H.M., Berberich, T., Tanaka, S., Nishiyama, M., Kanayama, Y., Kojima, S., Muramoto, K., & T. Kusano (2015): A novel strategy to produce sweeter tomato fruits with high sugar contents by fruit-specific expression of a single bZIP transcription factor gene. - Plant Biotechnology Journal, DOI: 10.1111/pbi.12479 L berberich@em.uni-frankfurt.de
Sagor, G.H.M., Chawla, P., Kim, D.W., Berberich, T., Kojima, S., Niitsu, M., & T. Kusano (2015): The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. - Frontiers in Plant Science 6:687. DOI: 10.3389/fpls.2015.00687 L berberich@em.uni-frankfurt.de
Sagor, G.H.M., Inoue, M., Kim, D.W., Kojima, S., Niitsu, M., Berberich, T. & T. Kusano (2015): The polyamine oxidase from lycophyte Selaginella lepidophylla (SelPAO5), unlike that of angiosperms, back-converts thermospermine to norspermidine. - FEBS Letters 589: 3071-3078, DOI: 10.1016/j.febslet.2015.08.045 L berberich@em.uni-frankfurt.de
Schmidt, H., Hangmann, J., Shams, I., Avivi, A. & T. Hankeln (2015): Molecular evolution of antioxidant and hypoxia response in long-lived, cancer-resistant blind mole rats: The Nrf2‐Keap1 pathway. - Gene L
Schregel, J., Eiken, H.G., Gröndahl, F.A., Hailer, F., Aspi, J., Kojola, I., Tirronen, K., Danilov, P., Rykov, A., Poroshin, E., Janke, A., Swenson, J.E. & S.B. Hagen (2015): Y chromosome haplotype distribution of brown bears (Ursus arctos) in Northern Europe provides insight into population history and recovery. - Molecular Ecology L axel.janke@senckenberg.de
Sielaff, M., Schmidt, H., Struck, T.H., Rosenkranz, D., Welch, DBM., Hankeln, T. & H. Herlyn (accepted): Phylogeny of Syndermata (syn. Rotifera): Mitochondrial gene order verifies epizoic Seisonidea as sister to endoparasitic Acanthocephala (thorny-headed worms) within monophyletic Hemirotifera. - Molecular Phylogenetics and Evolution L
Simaika, J.P., Stoll, S., Lorenz, A.W., Thomas, G., Sundermann, A. & P. Haase (2015): Bundles of stream restoration measures and their effects on fish communities. - Limnologica 55: 1-8. 7 peter.haase@senckenberg.de;stefan.stoll@senckenberg.de;andrea.sundermann@senckenberg.de
Stoll, S., Frenzel, M., Burkhard, B., Adamescu, M., Augustaitis, A., Baeßler, C., Bonet, F.J., Cazacu, C., Cosor, G.L., Díaz-Delgado, R., Carranza, M.L., Grandin, U., Haase, P., Hämäläinen, H., Loke, R., Müller, J., Stanisci, A., Staszewski, T. & F. Müller (2015): Assessment of ecosystem integrity and service gradients across Europe using the LTER Europe network. - Ecological Modelling 295: 75-87. 7 peter.haase@senckenberg.de;stefan.stoll@senckenberg.de
Tachamo-Shah, R.D., Sharma, S., Haase, P., Jähnig, S. & S.U. Pauls (2015): The climate sensitive zone along an altitudinal gradient in central Himalayan rivers: a useful concept to monitor climate change impacts in mountain regions. - Climatic Change. DOI: 10.1007/s10584-015-1417-z 6 peter.haase@senckenberg.de;steffen.pauls@senckenberg.de;pauls497@umn.edu;sonja.jaehnig@senckenberg.de
Thomas, G., Lorenz, A.W., Sundermann, A., Haase, P., Peter, A. & S. Stoll (2015): Fish community responses and the temporal dynamic of recovery following river habitat restorations in Europe. - Freshwater Science 34: 975-990. 7 peter.haase@senckenberg.de;stefan.stoll@senckenberg.de;andrea.sundermann@senckenberg.de
Vitecek, S., Previsic, A., Kucinic, M., Bálint, M., Keresztes, L., Waringer, J., Pauls, S.U., Malicky, H. & W. Graf (2015): Description of a new species of Wormaldia from Sardinia and a new Drusus species from the Western Balkans (Trichoptera, Philopotamidae, Limnephilidae). - ZooKeys 496: 85-103. 8 steffen.pauls@senckenberg.de;pauls497@umn.edu;Miklos.Balint@senckenberg.de
Waringer, J., Graf, W., Bálint, M., Kucinic, M., Pauls, S.U., Previsic, A., Keresztes, L., Ibrahimi, H., Zivic, I., Bjelanovic, K., Krpac, V. & S. Vitecek (2015): Larval morphology and phylogenetic position of Drusus balcanicus Kumanski, Drusus botosaneanui Kumanski, Drusus serbicus Marinković-Gospodnetić and Drusus tenellus (Klapálek) (Trichoptera: Limnephilidae: Drusinae). - European Journal of Entomology 112: 344-361. 8 steffen.pauls@senckenberg.de;pauls497@umn.edu;Miklos.Balint@senckenberg.de
Weigelt, P., Kissling, W.D., Kisel, Y., Fritz, S.A., Karger, D.N., Kessler, M., Lehtonen, S., Svenning, J.-C. & H. Kreft (2015): Global patterns and drivers of phylogenetic structure in island floras. - Scientific reports 5: 12213. 7 susanne.fritz@senckenberg.de