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International peer reviewed

Aarnes, S.G., Hagen, S.B., Andreassen, R., Schregel, J., Knappskog, P.M., Hailer, F., Stenhouse , G., Janke, A., & H.G. Eiken (2015): Y-chromosomal testing of brown bears (Ursus arctos): Validation of a multiplex PCR-approach for nine STRs suitable for fecal and hair samples. - Forensic Science International: Genetics
L axel.janke@senckenberg.de
Ahlering, M.A., Hailer, F., Roberts, M.T. & C. Foley (2011): A simple and accurate method to sex savannah, forest and Asian elephants using noninvasive sampling techniques. - Molecular Ecology Resources 11(5): 831–834. L
Bapteste, E. and van Iersel, L. and Janke, A. and Kelchner, S. and Kelk, S. and McInerney, J.O. and Morrison, D.A. and Nakhleh, L. and Steel, M. and Stougie, L. and Whitfield, J.(2013): Networks: expanding evolutionary thinking. - Trends in Genetics, 29 (8). pp. 439-441 L axel.janke@senckenberg.de
Bidon, T., Janke, A., Fain, S. R., Eiken, H. G., Hagen, S. B. Saarma, U.,Hallström, B. M., Lecomte, N. & F. Hailer (2014): Brown and Polar Bear Y Chromosomes Reveal Extensive Male-Biased Gene Flow within Brother Lineages. - Molecular Biology and Evolution (2014) 31 (6) L axel.janke@senckenberg.de
Bidon, T., Frosch, C., Eiken, H.G., Kutschera, V.E., Hagen, S.B., Aarnes, S.G., Fain, S.R., Janke, A. & F. Hailer (2013): A sensitive and specific multiplex PCR approach for sex identification of ursine and tremarctine bears suitable for non-invasive samples. - Molecular Ecology Resources 13(3): 362-368. L axel.janke@senckenberg.de;christiane.frosch@senckenberg.de
Bidon, T., Schreck, N., Hailer, F., Nilsson, M., & A. Janke (2015): Genome-wide search identifies 1.9 megabases from the polar bear Y chromosome for evolutionary analyses. - Genome Biology and Evolution L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de
Bock, F., Gallus, S., Janke, A., Hailer, F., Steck, B.L., Kumar, V. & M. A. Nilsson (2014): Genomic resources and genetic diversity of captive lesser kudu (Tragelaphus imberbis). - ZOO BIOLOGY 33: 440-445 L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de;friederike.reuss@senckenberg.de
Bock, F., Fennessy, J., Bidon, T., Tutchings, A., Marais, A., Deacon, F. & A. Janke (2014):: Mitochondrial sequences reveal a clear separation between Angolan and South African giraffe along a cryptic rift valley. - BMC Evolutionary Biology 2014, 14:219 L axel.janke@senckenberg.de;friederike.reuss@senckenberg.de
Domaschke, S., Fernandez Mendoza, F., Garcia, M.A., Martín, M.P. & C. Printzen (2012): Low genetic diversity in Antarctic populations of the lichen Cetraria aculeata and its photobiont. - Polar Research 31: 17353. L christian.printzen@senckenberg.de
Domaschke, S., Vivas, M., Sancho, L.G. & C. Printzen (2013): Ecophysiology and genetic structure of polar versus temperate populations of the lichen Cetraria aculeata. - Oecologia 173: 699-709. L christian.printzen@senckenberg.de
Edwards, S.V., Xi, Z., Janke, A., Faircloth, B.C., McCormack, J.E., Glenn, T.C., Zhong, B., Wu, S., Lemmon, E.M., Lemmon, A.R., Leaché, A.D., Liu, L. & C.C. Davis (2015): Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics. - Molecular Phylogenetics and Evolution 94 A: 447–462 L axel.janke@senckenberg.de
Feldmeyer B., Hoffmeier, K. & M. Pfenninger (2010): The complete mitochondrial genome of Radix balthica (Pulmonata, Basommatophora), obtained by low coverage shot gun next generation sequencing. Molecular Phylogenetics and Evolution 57: 1329-1333. L Pfenninger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Feldmeyer B., Mazur J., Beros S., Lerp H., Binder H., & S. Foitzik (2016): Gene expression patterns underlying parasite-induced alterations in host behaviour and life history. - Molecular Ecology L barbara.feldmeyer@senckenberg.de
Feldmeyer, B., Greshake, B., Funke, E., Ebersberger, I. & M. Pfenninger (2015): Positive selection in development and growth rate regulation genes involved in species divergence of the genus Radix.- BMC Evolutionary Biology L bgreshake@googlemail.com;Pfenninger@bio.uni-frankfurt.de;ebersberger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Feldmeyer, B., Wheat, C., Krezdorn, N., Rotter, B. & M. Pfenninger (2011): Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance. - BMC Genomics 12:317. L Pfenninger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Fennessy, J., Bidon, T., Reuss, F., Kumar, V., Elkan, P., Nilsson, M.A., Vamberger, M., Fritz, U. & A. Janke (2016): Multi-locus Analyses Reveal Four Giraffe Species Instead of One. - Current Biology , doi:10.1016/j.cub.2016.07.036. L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de;friederike.reuss@senckenberg.de
Fennessy, J., Bock, F., Tutchings, A., Brenneman, R. & A. Janke (2013): Mitochondrial DNA analyses show that Zambia's South Luangwa Valley giraffe (Giraffa camelopardalis thornicrofti) are genetically isolated. - African Journal of Ecology 51: 635–640. L axel.janke@senckenberg.de;friederike.reuss@senckenberg.de
Fernández-Mendoza, F. & C. Printzen (2013): Pleistocene expansion of the bipolar lichen Cetraria aculeata into the Southern hemisphere. - Molecular Ecology 22: 1961-1983. L christian.printzen@senckenberg.de
Fernandez-Mendoza, F., Domaschke, S., Garcia, M.A., Jordan, P., Martin, M.P. & C. Printzen (2011): Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata. - Molecular Ecology 20: 1208–1232. L christian.printzen@senckenberg.de
Gallus S., Lammers F. & M. Nilsson Janke (2016): When Genomics is not Enough: Experimental Evidence for a Decrease in LINE-1 Activity During the Evolution of Australian Marsupials. - Genome Biology and Evolution L susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;fritjof.lammers@senckenbrg.de
Gallus, S., Hallström, B. M., Kumar, V., Dodt, W. G., Janke, A, Schumann, G. G. & M. Nilsson Janke (2015): Evolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devil. - Molecular Biology and Evolution (early Access) L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Gallus, S., Janke, A., Kumar, V & M.A. Nilsson (2015): Disentangling the relationship of the Australian marsupial orders using retrotransposon and evolutionary network analyses. - Genome Biology and Evolution   L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Gallus, S., Kumar, V., Bertelsen, M.F., Janke, A. & M.A. Nilsson (2015): Survey sequencing of the Java Mouse Deer (Tragulus javanicus) and Lesser kudu (Tragelaphus imberbis) genomes revealed differential expansion of RTE elements in Ruminantia. Gene Vol 571 (2) 271 - 278 L axel.janke@senckenberg.de;susanne.gallus@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
González-Porter, G.P., Maldonado, J.E., Flores-Villela, O., Vogt, R.C., Janke, A., Fleischer, R.C. & F. Hailer (2013): Cryptic population structuring and the role of the Isthmus of Tehuantepec as a gene flow barrier in the critically endangered Central American River Turtle. - PLoS ONE 8(9): e71668. L axel.janke@senckenberg.de
Hailer, F., Kutschera, V.E., Hallström, B.M., Klassert, D., Fain, S.R., Leonard, J.A., Arnason, U. & A. Janke (2012): Nuclear genomic sequences reveal that polar bears are an old and distinct bear lineage. - Science. 336: 344-347. L axel.janke@senckenberg.de
Hailer, F., Kutschera, V.E., Hallström, B.M., Fain, S.R., Leonard, J.A., Arnason, U. & A. Janke (2013): Response to Comment on ‘Nuclear Genomic Sequences Reveal that Polar Bears Are an Old and Distinct Bear Lineage’. - Science 339: 1522, doi: 10.1126/science.1228066 L axel.janke@senckenberg.de
Hailer, F., James, H.F., Olson, S.L. and Robert C. Fleischer (2015):: Distinct and extinct: Genetic differentiation of the Hawaiian eagle. - Molecular Phylogenetics and Evolution, Vol. 83, February 2015, 40–43 L
Hallström, B.M. & A. Janke (2010): Mammalian evolution may not be strictly bifurcating. - Molecular Biology and Evolution, 27 (12): 2804-2816. doi: 10.1093/molbev/msq166 . L axel.janke@senckenberg.de
Hallström, B.M., Schneider, A., Zoller, S. & A. Janke (2011): A genomic approach to examine the complex evolution of laurasiatherian mammals. - PLoS ONE 6:e28199. L axel.janke@senckenberg.de
Haun, T., Salinger, M., Pachzelt, A. & M. Pfenninger (2012): On the processes shaping small-scale population structure in Radix balthica (Linnaeus 1758). - Malacologia 55(2): 219-233. L Pfenninger@bio.uni-frankfurt.de;adrian.pachzelt@senckenberg.de
Huck, S., Büdel, B., Kadereit, J.W. & C. Printzen (2009): Range-wide phylogeography of the European temperate-montane herbaceous plant Meum athamanticum Jacq.: evidence for periglacial persistence - Journal of Biogeography 36, 1588-1599. L christian.printzen@senckenberg.de
Janke, A. (2010): The Rise of Amphibians: 365 Million Years of Evolution. - Systematic Biology 59(4): 488-490. L axel.janke@senckenberg.de
Jansen, M., Bloch, R., Schulze, A. & M. Pfenninger (2011): Integrative inventory of Bolivia’s lowland anurans reveals hidden diversity. - Zoologica Scripta 40, 567-583. L Pfenninger@bio.uni-frankfurt.de;arne.schulze@senckenberg.de
Jansen, M. & G. Köhler: Reptilia, Squamata, Amphisbaenidae, Amphisbaena cegei Montero, 1997, and Reptilia, Squamata, Teidae, Tupinambis rufescens (Günther, 1871): vertical range extension. CheckList 6(4):503-504.
L
Jedmowski, C., Ashoub, A., Beckhaus ,T ., Berberich, T., Karas, M. & W. Brueggemann (2014):: Comparative analysis of Sorghum bicolor proteome in response to drought stress and following recovery. -  Int J Proteomics L W.Brueggemann@bio.uni-frankfurt.de;tberberich@senckenberg.de;Ahshoub@hotmail.com
Kalchhauser, I., Kutschera, V.E. & P. Burkhardt-Holm (2014): The complete mitochondrial genome of the invasive Ponto-Caspian goby Ponticola kessleri obtained from high-throughput sequencing using the Ion Torrent Personal Genome Machine. - Mitochondrial DNA: 1-3. L
Kawai, K., Hailer, F., de Guia, A.P., Ichikawa, H. & T. Saitoh (2013): Refugia in glacial ages lead to the current discontinuous distribution patterns of the dark red-backed vole Myodes rex on Hokkaido, Japan. - Zoological Science, in press. L
Kersken, D., Feldmeyer, B. & D. Janussen (2016): Sponge communities of the Antarctic Peninsula: influence of environmental variables on species composition and richness. Polar Biology L barbara.feldmeyer@senckenberg.de
Khan, A.A., Janke, A., Shimokawa, T. & H. Zhang (2011): Phylogenetic analysis of kindlins suggests subfunctionalization of an ancestral unduplicated kindlin into three paralogs in vertebrates. -  Evolutionary Bioinformatics online 7:7-19. [0] L axel.janke@senckenberg.de
Kim, D.W., Watanabe, K., Murayama, C., Izawa, S., Niitsu, M., Michael, A.J., Berberich, T. & T. Kusano (2014): Polyamine oxidase 5 regulates Arabidopsis thaliana growth through a thermospermine oxidase activity. - Plant Physiology (in press) pii: pp.114.242610 L tberberich@senckenberg.de
Kleven, O., Hallström, B.M., Hailer, F., Janke, A., Hagen, S.B., Kopatz, A. & G.H. Eiken (2012): Identification and evaluation of novel di- and tetranucleotide microsatellite markers from the brown bear (Ursus arctos). - Conservation Genetics Resources 4: 737-741. L axel.janke@senckenberg.de
Kuhn, T., Hailer, F., Palm, H.W. & S. Klimpel (2013): Global assessment of molecularly identified Anisakis Dujardin, 1845 (Nematoda: Anisakidae) in their teleost intermediate hosts. - Folia Parasitologica 60(2): 123-134. L sven.klimpel@senckenberg.de;thomas.kuhn@senckenberg.de
Kumar, V., Kutschera, V.E., Nilsson, M.A. & A. Janke (2015): Genetic signatures of adaptation revealed from transcriptome sequencing of Arctic and red foxes. - BMC Genomics (2015) 16:585 L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Kumar, V., Hallström, B.M. & A. Janke (2013): Coalescent-Based Genome Analyses Resolve the Early Branches of the Euarchontoglires. - PLoS ONE 8(4): e60019. L axel.janke@senckenberg.de;Vikas.Kumar@senckenberg.de
Kunihiro, S., Kowata, H., Kondou, Y., Takahashi, S., Matsui, M., Berberich, T., Youssefian, S., Hidema, J. & T. Kusano (2014): Overexpression of rice OsREX1-S, encoding a putative component of the core general transcription and DNA repair factor IIH, renders plant cells tolerant to cadmium- and UV-induced damage by enhancing DNA excision repair. - Planta 239: 1101-1111. L tberberich@senckenberg.de
Kunihiro, S., Saito, T., Matsuda, T., Inoue, M., Kuramata, M., Taguchi-Shiobara, F., Youssefian, Y., Berberich, T. & T. Kusano (2013): Rice DEP1, encoding a highly cysteine-rich G protein γ subunit, confers cadmium tolerance on yeast cells and plants. - Journal of Experimental Botany 64: 4517–4527. L tberberich@senckenberg.de
Kutschera, V. E., Bidon, T., Hailer, F., Rodi, J. L., Fain, S. R., & A. Janke (2014): Bears in a forest of gene trees: Phylogenetic inference is complicated by incomplete lineage sorting and gene flow. - Molecular Biology and Evolution 31(8):2004–2017 L axel.janke@senckenberg.de
Kutschera, V.E., Frosch, C., Janke, A., Skirnisson, K., Bidon, T., Lecomte, N., Fain, S.R., Eiken, H.G., Hagen, S.B,. Arnason, U., Laidre, K.L., Nowak, C. & F. Hailer (2016): High genetic variability of vagrant polar bears illustrates importance of population connectivity in fragmented sea ice habitats. - Animal conservation, doi:10.1111/acv.12250.
L axel.janke@senckenberg.de;Carsten.Nowak@senckenberg.de;christiane.frosch@senckenberg.de
Kutschera, V.E., Lecomte, N., Janke, A., Selva, N., Sokolov, A.A., Haun, T., Steyer, K., Nowak, C. & F. Hailer (2013): A range-wide synthesis and timeline for phylogeographic events in the red fox (Vulpes vulpes). - BMC Evolutionary Biology 13(1): 114. L axel.janke@senckenberg.de;Carsten.Nowak@senckenberg.de
Langguth, T., Honnen, A.C., Hailer, F., Mizera, M., Skoric, S., Väli, Ü. & F.E. Zachos (2013): Genetic structure and phylogeography of a European flagship species, the white-tailed sea eagle (Haliaeetus albicilla). - Journal of Avian Biology 44(3): 263-271, doi: 10.1111/j.1600-048X.2012.00075.x. L
Leavitt, S.D., Fernández-Mendoza, F., Perez-Ortega, S., Sohrabi, M., Divakar, P.K., Vondrak, J., Lumbsch, H.T. & L.L. St Clair (2013): Local representation of global diversity in a cosmopolitan lichen-forming fungal species complex (Rhizoplaca, Ascomycota). - Journal of Biogeography 40: 1792-1806. L
Lerp, H., Klaus, S., Allgöwer, S., Wronski ,T., Pfenninger, M. & M. Plath (2016): Phylogenetic analyses of gazelles reveal repeated transitions of key ecological traits and provide novel insights into the origin of the genus Gazella. - Molecular Phylogenetics and Evolution L Pfenninger@bio.uni-frankfurt.de
Lerp, H., Wronski, T., Pfenninger, M. & M. Plath (2011): A phylogeographic framework for the conservation of Saharan and Arabian dorcas gazelles (Artiodactyla: Bovidae). - Organisms, Diversity and Evolution 11, 317-329. L Pfenninger@bio.uni-frankfurt.de
Lerp, H., Wronski, T., Plath, M., Schröter, A. & M. Pfenninger (2013): Phylogenetic and population genetic analyses suggest a potential species boundary between Mountain (Gazella gazella) and Arabian Gazelles (G. arabica) in the Levant. - Mammalian Biology 78: 383-386.  L Pfenninger@bio.uni-frankfurt.de
Liu, T., Dobashi, H., Kim, D.W., Sagor, G.H.M., Niitsu, M., Berberich, T. & T. Kusano (2014): Arabidopsis mutant plants with diverse defects in polyamine metabolism show unequal sensitivity to exogenous cadaverine probably based on their spermine content. - Physiology and Molecular Biology of Plants 20: 151-159. L tberberich@senckenberg.de
Liu, T., Kim, D.W., Niitsu , M., Berberich ,T. & T. Kusano (2014):: Polyamine oxidase 1 from rice (Oryza sativa) is a functional ortholog of Arabidopsis Polyamine oxidase 5. - Plant Signaling & Behavior Volume 9, Issue 9
L tberberich@senckenberg.de
Liu, T., Kim, D.W., Niitsu, M., Berberich, T. & T. Kusano (2014): Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. - Plant Cell Reports 33: 143-151. L tberberich@senckenberg.de
Liu, T., Kim, D.W., Niitsu, M., Maeda, S., Watanabe, M., Kamio, Y., Berberich, T. & T. Kusano (2014): Polyamine oxidase 7 is a terminal catabolism-type enzyme in Oryza sativa and is specifically expressed in anther organ. - Plant Cell Physiology, DOI: 10.1093/pcp/pcu047. L tberberich@senckenberg.de
M. Nilsson Janke (2015): The devil is in the details: transposable element analysis of the Tasmanian devil genome. - Mobile Genetic Elements L Maria.Nilsson-Janke@senckenberg.de
McCune, B. & C. Printzen (2011): Distribution and climatic niches of the Lecanora varia group in western U.S.A. - Bibliotheca Lichenologica 106, 225-234. L christian.printzen@senckenberg.de
Merker, S., Boucsein, D., Feldmeyer, B., Perwitasari-Farajallah, D. & B. Streit (2012): Novel tetra- and pentanucleotide microsatellite markers allow for multiplexed genotyping of Sulawesi tarsiers (Tarsius spp.). - Conservation Genetics Resources 4: 343-345. L streit@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Mežaka, A., Brumelis, G., Piterans, A. & C. Printzen (2012): Distribution of Lepraria in relation to tree substratum and deciduous forest type (Lepraria in deciduous forests). - Annales Botanici Fennici 49: 162-170. L christian.printzen@senckenberg.de
Müller, R., Charaf, S., Scherer, C., Oppold, A., Oehlmann, J. & M. Wagner (2016): Phenotypic and epigenetic effects of vinclozolin in the gastropod Physella acuta (accepted). - Journal of Molluscan Studies L Oehlmann@bio.uni-frankfurt.de;ann-marie.oppold@senckenberg.de
Nemec, S., Patel, S., Nowak, C. & M. Pfenninger (2013): Evolutionary determinants of population differences in population growth rate x habitat temperature interactions in Chironomus riparius. - Oecologia 172: 585-594. L Pfenninger@bio.uni-frankfurt.de;Carsten.Nowak@senckenberg.de;sabrina.nemec@senckenberg.de
Nemec, S., Heß, M., Nowak, C. & M. Pfenninger (2012): Experimental evidence for niche segregation in a species pair of non-biting midges. - Hydrobiologia 691: 203-212. L Pfenninger@bio.uni-frankfurt.de;Carsten.Nowak@senckenberg.de;sabrina.nemec@senckenberg.de
Nilsson M.A., Härlid A., Kullberg M. & A. Janke (2010): The impact of fossil calibrations, codon positions and relaxed clocks on the divergence time estimates of the native Australian rodents (Conilurini). - Gene 455(1-2): 22-31. L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de
Nilsson, M.A., Klassert, D., Bertelsen, M.F., Hallström, B.M. & A. Janke (2012): Activity of Ancient RTE Retroposons during the Evolution of Cows, Spiral-Horned Antelopes, and Nilgais (Bovinae). - Molecular Biology and Evolution 29 (10): 2885-2888. L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de
Nilsson, M.A., Janke, A., Murchison, E.P., Ning, Z. & B.M. Hallström (2012): Expansion of CORE-SINEs in the genome of the Tasmanian devil. - BMC Genomics. 2012 May 6; 13(1): 172. L axel.janke@senckenberg.de;Maria.Nilsson-Janke@senckenberg.de
Ono, Y., Kim, D. W., Watanabe, K., Sasaki, A., Niitsu, M., Berberich, T., Kusano, T., & Y. Takahashi (2012): Constitutively and highly expressed Oryza sativa polyamine oxidases localize in peroxisomes and catalyze polyamine back conversion.  - Amino Acids 42: 867-876. DOI: 10.1007/s00726-011-1002-3 L Link zur Publikation
Oppold, A., Kreß, A., Vanden Bussche, J., Diogo, J.B., Kuch, U., Oehlmann, J., Vandegehuchte, M.B. & R. Müller (2015): Epigenetic alterations and decreasing insecticide sensitivity of the Asian tiger mosquito Aedes albopictus. -   Ecotoxicology and Environmental Safety 122, p 45-53 L Oehlmann@bio.uni-frankfurt.de;kress@bio.uni-frankfurt.de;ann-marie.oppold@senckenberg.de;joao.diogo@senckenberg.de
Oppold, A.-M., Pedrosa, J.A.M., Balint, M., Diogo, J. B., Ilkova, J., Pestana, J.L.T. & M. Pfenninger (2016): Support for the evolutionary Speed hypothesis from intraspecific Population genetic data in the non-biting midge Chironomus riparius. - Proceedings of the Royal Society B  L Pfenninger@bio.uni-frankfurt.de;Miklos.Balint@senckenberg.de;ann-marie.oppold@senckenberg.de;joao.diogo@senckenberg.de
Patel, S., Schell, T., Eifert, C., Feldmeyer, B. & M. Pfenninger (2015): Characterizing a hybrid zone between a cryptic species pair of freshwater snails. - Molecular Ecology, 24: 643–655 L Pfenninger@bio.uni-frankfurt.de
Pen, I., Uller, T., Feldmeyer, B., Harts, A., While, G. M. & E. Wapstra (2010): Climate-driven population divergence in sex-determining systems. - Nature 468: 436-438. L barbara.feldmeyer@senckenberg.de
Pérez-Losada, M., Bloch. R., Breinholt, J.W., Pfenninger, M. & J. Domínguez (2012): Taxonomic assessment of Lumbricidae (Oligochaeta) earthworm genera using DNA barcodes. - European Journal of Soil Biology 48: 41-47. L Pfenninger@bio.uni-frankfurt.de
Pérez-Ortega, S., Fernández Mendoza, F., Raggio, J., Vivas, M., Ascaso, C., Sancho, L.G., Printzen, C. & A. de los Ríos (2012): Extreme phenotypic variation in Cetraria aculeata (lichenized Ascomycota): Adaptation or incidental modification? - Annals of Botany 109: 1133-1148. L christian.printzen@senckenberg.de
Pfenninger, M., Bálint, M., & S.U. Pauls (2012): Methodological framework for projecting the potential loss of intraspecific genetic diversity due to global climate change. - BMC Evolutionary Biology 12: 224. L Pfenninger@bio.uni-frankfurt.de;steffen.pauls@senckenberg.de;pauls497@umn.edu;Miklos.Balint@senckenberg.de
Pfenninger, M., Weigand A., Balint, M., Klussmann-Kolb A. (2014): Misperceived invasion: The Lusitanian slug (Arion lusitanicus auct. non-Mabille or Arion vulgaris Moquin-Tandon 1855) is native to Central Europe. - Evolutionary Applications, 7: 702-713 L Pfenninger@bio.uni-frankfurt.de;Miklos.Balint@senckenberg.de
Pfenninger, M., & M. Plath (2016): Ist Evolution vorhersagbar? - Biologie in unserer Zeit L Pfenninger@bio.uni-frankfurt.de
Pfenninger, M., Lerp, H., Tobler, M., Passow, C., Kelley, J. L., Funke, E., Greshake, B., Erkoc, U. K., Berberich, T. & M. Plath (2014): Parallel evolution of cox genes in H2S-tolerant fish as key adaptation to a toxic Environment. - Nature Communications, DOI: 10.1038/ncomms4873
L bgreshake@googlemail.com;Pfenninger@bio.uni-frankfurt.de;mplath@bio.uni-frankfurt.de;tberberich@senckenberg.de
Pfenninger, M., Salinger, M., Haun, T. & B. Feldmeyer (2011): Factors and processes shaping the population structure and distribution of genetic variation across the species range of the freshwater snail radix balthica (Pulmonata, Basommatophora). - BMC Evolutionary Biology 11:135. L Pfenninger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Pfenninger, M., Vela, E., Jesse, R., Arantzazu Elejalde, M., Liberto, F., Magnin, F. & A. Martinez-Ortia (2010): Temporal speciation pattern in the western Mediterranean genus / Tudorella/ P. Fischer, 1885 (Gastropoda, Pomatiidae) supports the Tyrrhenian vicariance hypothesis. - Molecular Phylogenetics and Evolution 54 (2010) 427–436. L Pfenninger@bio.uni-frankfurt.de
Plath, M., Pfenninger, M., Lerp, H., Riesch, R., Eschenbrenner, C., Slattery, P.A., Bierbach, D., Herrmann, N., Schulte, M., Arias-Rodriguez, L., Rimber Indy, J., Passow, C. & M. Tobler (2013): Genetic differentiation and selection against migrants in evolutionarily replicated extreme environments. - Evolution. Doi:10.1111/evo.12133. L Pfenninger@bio.uni-frankfurt.de
Printzen, C., Domaschke, S., Fernández-Mendoza, F. & S. Pérez-Ortega (2013): Biogeography and ecology of Cetraria aculeata, a widely distributed lichen with a bipolar distribution. In: Kansri Boonpragob, Peter Crittenden, H.Thorsten Lumbsch (Eds) Lichens: from genome to ecosystems in a changing world. - MycoKeys 6 (Special Issue): 33-53. L christian.printzen@senckenberg.de
Printzen, C., Fernández-Mendoza, F., Muggia, L., Berg, G. & M. Grube (2012): Alphaproteobacterial communities in geographically distant populations of the lichen Cetraria aculeata. - FEMS Microbiology Ecology 82: 316-325. L christian.printzen@senckenberg.de
Printzen, C. (2009): Uncharted terrain: The phylogeography of arctic and boreal lichens. - Plant Ecology and Diversity 1: 265-271. L christian.printzen@senckenberg.de
Psouni, E., Janke, A. & M. Garwicz (2012): Impact of Carnivory on Human Development and Evolution Revealed by a New Unifying Model of Weaning in Mammals. - PLoS ONE 7(4): e32452. L axel.janke@senckenberg.de
Römbke, J., Aira, M., Backeljau, T., Breugelmans, K., Dominguez, J., Funke, E., Graf, N., Hajibabaei, M., Perez-Losada, M., Porto, P.G., Schmelz, R.M., Vierna, J., Vizcaino, A & M. Pfenninger (2015): DNA barcoding of earthworms (Eisenia fetida/andrei complex) from 28 ecotoxicological test laboratories. Applied Soil Ecology L Pfenninger@bio.uni-frankfurt.de
Romero, P., Pfenninger, M., Kano, Y. & A. Klussmann-Kolb (2016): Molecular phylogeny of the Ellobiidae (Gastropoda: Panpulmonata) supports independent terrestrial invasions. - Molecular Phylogenetics and Evolution 97: 43-54. L Pfenninger@bio.uni-frankfurt.de;pedro.romero@senckenberg.de
Ruprecht, U., Brunauer, G. & C. Printzen (2012): Photobiont diversity and richness in lecideoid Antarctic lichens from an ecological point of view. - Lichenologist 44: 661-678. L christian.printzen@senckenberg.de
Sagor, G.H.M., Berberich, T., Kojima, S., Niitsu, M. & T. Kusano (2016): Spermine modulates the expression of two probable polyamine transporter genes and determines growth responses to cadaverine in Arabidopsis. - Plant Cell Reports 35:1247-1257. DOI 10.1007/s00299-016-1957-3. L tberberich@senckenberg.de
Sagor, G.H.M., Berberich, T., Takahashi, Y., Niitsu, M. & T. Kusano (2013): The polyamine spermine protects Arabidopsis from heat stress-induced damage by increasing expression of heat shock-related genes. - Transgenic Research 22: 595-605. L tberberich@senckenberg.de
Sagor, G.H.M., Berberich, T., Tanaka, S., Nishiyama, M., Kanayama, Y., Kojima, S., Muramoto, K., & T. Kusano (2015): A novel strategy to produce sweeter tomato fruits with high sugar contents by fruit-specific expression of a single bZIP transcription factor gene. - Plant Biotechnology Journal, DOI: 10.1111/pbi.12479 L tberberich@senckenberg.de
Sagor, G.H.M., Chawla, P., Kim, D.W., Berberich, T., Kojima, S., Niitsu, M., & T. Kusano (2015): The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. - Frontiers in Plant Science 6:687. DOI: 10.3389/fpls.2015.00687 L tberberich@senckenberg.de
Sagor, G.H.M., Inoue, M., Kim, D.W., Kojima, S., Niitsu, M., Berberich, T. & T. Kusano (2015): The polyamine oxidase from lycophyte Selaginella lepidophylla (SelPAO5), unlike that of angiosperms, back-converts thermospermine to norspermidine. - FEBS Letters 589: 3071-3078, DOI: 10.1016/j.febslet.2015.08.045 L tberberich@senckenberg.de
Sagor, G.H.M., Liu, T., Takahashi, H., Niitsu, M., Berberich, T. & T. Kusano (2013): Longer uncommon polyamines have a stronger defense gene-induction activity and a higher suppressing activity of Cucumber mosaic virus multiplication compared to that of spermine in Arabidopsis thaliana. -Plant Cell Reports, doi 10.1007/s00299-013-1459-5. L tberberich@senckenberg.de
Sagor, G.H.M., Takahashi, H., Niitsu, M., Takahashi, Y., Berberich, T. & T. Kusano (2012): Exogenous thermospermine has an activity to induce a subset of the defense genes and restrict cucumber mosaic virus multiplication in Arabidopsis thaliana. - Plant Cell Reports DOI 10.1007/s00299-012-1243-y L Link zur Publikation
Sagor, G.H.M., Yamaguchi, K., Watanabe, K., Berberich, T., Kusano, T., Takahashi, Y. (2011):  Spatio-temporal expression analysis of Arabidopsis thaliana spermine synthase gene promoter. - Plant Biotechnology 28: 407–411. DOI: 10.5511/plantbiotechnology.11.0704a L Link zur Publikation
Sagor, G.H.M., Zhang, S., Kojima, S., Simm, S., Berberich, T. & T. Kusano (2016): Reducing cytoplasmic polyamine oxidase activity in Arabidopsis increases salt and drought tolerance by reducing reactive oxygen species production and increasing defense gene expression. - Frontiers Plant Science 7:214. DOI: 10.3389/fpls.2016.00214. L tberberich@senckenberg.de
Salinger, M. & M. Pfenninger (2009): Highly polymorphic microsatellite markers for Radix balthica (Linnaeus 1758). - Molecular Ecology Ressources 9, 1152-1155. L Pfenninger@bio.uni-frankfurt.de
Sanchez Donoso, I., Huisman, J., Echagaray, J., Puigcerver, M., Rodríguez Teijeiro, J.D., Hailer, F. & C. Vilà (2014):

Detecting slow introgression of invasive alleles in an extensively restocked game bird. - Frontiers in Ecology and Evolution 2: 15.

L
Scharf, K.-D., Berberich, T. , Ebersberger, I. & L. Nover (2012): The plant heat stress transcription factor (Hsf) family: structure, function and evolution.  - Biochimica et Biophysica Acta 1819: 104–119; 10.1016/j.bbagrm.2011.10.002 L Link zur Publikation
Schmidt, H., Greshake, B., Feldmeyer, B., Hankeln, T. & M. Pfenninger (2013): Genomic basis of ecological niche divergence among cryptic sister species of non-biting midges. - BMC Genomics 14: 384. L bgreshake@googlemail.com;Pfenninger@bio.uni-frankfurt.de;barbara.feldmeyer@senckenberg.de
Schmidt, H., Hangmann, J., Shams, I., Avivi, A. & T. Hankeln (2015): Molecular evolution of antioxidant and hypoxia response in long-lived, cancer-resistant blind mole rats: The Nrf2‐Keap1 pathway. - Gene L
Schregel, J., Eiken, H.G., Gröndahl, F.A., Hailer, F., Aspi, J., Kojola, I., Tirronen, K., Danilov, P., Rykov, A., Poroshin, E., Janke, A., Swenson, J.E. & S.B. Hagen (2015): Y chromosome haplotype distribution of brown bears (Ursus arctos) in Northern Europe provides insight into population history and recovery. - Molecular Ecology L axel.janke@senckenberg.de
Schulze, A. & M. Jansen: A tadpole of Trachycephalus venulosus (Anura: Hylidae) as prey for a fishing spider (Araneae: Pisauridae) in the Bolivian Chiquitano Dry Forest. Herpetology Notes 3: 297-298. L arne.schulze@senckenberg.de
Shenton, M.R., Berberich, T., Kamo, M., Yamashita, T., Taira, H. & R. Terauchi (2012): Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction. Journal of Plant Research, DOI: 10.1007/s10265-012-0473-y L tberberich@senckenberg.de
Sielaff, M., Schmidt, H., Struck, T.H., Rosenkranz, D., Welch, DBM., Hankeln, T. & H. Herlyn (accepted): Phylogeny of Syndermata (syn. Rotifera): Mitochondrial gene order verifies epizoic Seisonidea as sister to endoparasitic Acanthocephala (thorny-headed worms) within monophyletic Hemirotifera. - Molecular Phylogenetics and Evolution L
Takahashi, Y., Cong, R., Sagor, G.H., Niitsu, M., Berberich, T., Kusano, T. (2010): Characterization of five polyamine oxidase isoforms in Arabidopsis thaliana. - Plant Cell Rep 29: 955–965 L Link zur Publikation
Thalor, S.K., Berberich, T., Lee, S.S., Yang, S.H., Zhu, XJ.,Imai, R., Takahashi, Y. & T. Kusano (2012): Deregulation of sucrose-controlled translation of a bZIP-type transcription factor results in sucrose accumulation in leaves. - PLoS ONE 7(3): e33111. doi:10.1371/journal.pone.0033111 L Link zur Publikation
Tills, O., Rundle, S.D., Salinger, M., Haun, T., Pfenninger, M. & J.I. Spicer (2011): A genetic basis for intra-specific differences in developmental timing? - Evolution and Development 13(6): 542-548. L Pfenninger@bio.uni-frankfurt.de
Yang, S.H., Kim, S.-H., Berberich, T. & T. Kusano (2012): Identification and properties of a small protein that interacts with a bZIP-type transcription factor during senescence and flower development in tobacco plants. - Plant Biotechnology 29, DOI: 10.5511/plantbiotechnology.12.0508b L tberberich@senckenberg.de
Zhu, X., Thalor, S.K., Takahashi, Y., Berberich, T. & T. Kusano (2012): An inhibitory effect of the sequence-conserved upstream open reading frame on the translation of the main open-reading frame of HsfB1 transcripts in Arabidopsis. - Plant, Cell & Environment. DOI: 10.1111/j.1365-3040.2012.02533.x. L tberberich@senckenberg.de
Zimmermann, T., Bocksberger, G., Brüggemann, W. & T. Berberich (2013): Phylogenetic relationship and molecular taxonomy of African grasses of the genus Panicum inferred from four chloroplast DNA-barcodes and nuclear gene sequences. - Journal of Plant Research 126: 363-371. L W.Brueggemann@bio.uni-frankfurt.de;tberberich@senckenberg.de;gbocksberger@senckenberg.de